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1

Stochastic Modeling and Simulation of Traffic Flow: Asymmetric Single Exclusion Process with Arrhenius Look-Ahead Dynamics

Alexandros Sopasakis and Markos A. Katsoulakis

Journal:

SIAM Journal on Applied Mathematics

Year:

2006

Language:

english

File:

PDF, 1.37 MB

english, 2006

2

How Biased Is Your Model? Concentration Inequalities, Information and Model Bias

Gourgoulias, Konstantinos, Katsoulakis, Markos A., Rey-Bellet, Luc, Wang, Jie

Journal:

IEEE Transactions on Information Theory

Year:

2020

File:

PDF, 1.17 MB

2020

3

Potential Impact of Seatbelt Use on the Spectrum of Ocular Injuries and Visual Acuity Outcomes after Motor Vehicle Accidents with Airbag Deployment

Sunil K. Rao, Paul B. Greenberg, Theodoros Filippopoulos, Ingrid U. Scott, Nickolas P. Katsoulakis, Yoash R. Enzer

Journal:

Year:

2008

Language:

english

File:

PDF, 100 KB

english, 2008

4

Pharmacogenomics and breast cancer

Lymberis, Stella C, Parhar, Preeti K, Katsoulakis, Evangelia, Formenti, Silvia C

Journal:

Pharmacogenomics

Year:

2004

Language:

english

File:

PDF, 262 KB

english, 2004

5

Stochastic Modeling and Simulation of Traffic Flow: Asymmetric Single Exclusion Process with Arrhenius look-ahead dynamics

Sopasakis, Alexandros, Katsoulakis, Markos A.

Journal:

SIAM Journal on Applied Mathematics

Year:

2006

Language:

english

File:

PDF, 3.91 MB

english, 2006

6

Multilevel coarse graining and nano-pattern discovery in many particle stochastic systems

Evangelia Kalligiannaki, Markos A. Katsoulakis, Petr Plecháč, Dionisios G. Vlachos

Journal:

Journal of Computational Physics

Year:

2012

Language:

english

File:

PDF, 1.24 MB

english, 2012

7

Stochastic Ising models and anisotropic front propagation

M. A. Katsoulakis, P. E. Souganidis

Journal:

Journal of Statistical Physics

Year:

1997

Language:

english

File:

PDF, 1.01 MB

english, 1997

8

Hyperbolic Systems with Supercharacteristic Relaxations and Roll Waves

Shi Jin and Markos A. Katsoulakis

Journal:

SIAM Journal on Applied Mathematics

Year:

2000

Language:

english

File:

PDF, 1.68 MB

english, 2000

9

Generalized motion by mean curvature as a macroscopic limit of stochastic ising models with long range interactions and Glauber dynamics

Markos A. Katsoulakis, Panagiotis E. Souganidis

Journal:

Communications in Mathematical Physics

Year:

1995

Language:

english

File:

PDF, 1.55 MB

english, 1995

10

Relaxation schemes for curvature-dependent front propagation

Shi Jin, Markos A. Katsoulakis, Zhouping Xin

Journal:

Communications on Pure and Applied Mathematics

Year:

1999

Language:

english

File:

PDF, 298 KB

english, 1999

11

Binomial distribution based τ-leap accelerated stochastic simulation

Chatterjee, Abhijit, Vlachos, Dionisios G., Katsoulakis, Markos A.

Journal:

The Journal of Chemical Physics

Year:

2005

Language:

english

File:

PDF, 440 KB

english, 2005

12

Global sensitivity analysis of multiscale properties of porous materials

Um, Kimoon, Zhang, Xuan, Katsoulakis, Markos, Plechac, Petr, Tartakovsky, Daniel M.

Journal:

Journal of Applied Physics

Year:

2018

Language:

english

File:

PDF, 2.47 MB

english, 2018

13

Explainable and trustworthy artificial intelligence for correctable modeling in chemical sciences

Feng, Jinchao, Lansford, Joshua L., Katsoulakis, Markos A., Vlachos, Dionisios G.

Journal:

Science Advances

Year:

2020

File:

PDF, 3.88 MB

2020

14

Hyperbolic Systems with Supercharacteristic Relaxations and Roll Waves

Katsoulakis, Markos A., Jin, Shi

Journal:

SIAM Journal on Applied Mathematics

Year:

2000

Language:

english

File:

PDF, 527 KB

english, 2000

15

Contractive relaxation systems and the scalar multidimensional conservation law

Katsoulakis, Markos A., Tzavaras, Athanasios E.

Journal:

Communications in Partial Differential Equations

Year:

1997

Language:

english

File:

PDF, 3.41 MB

english, 1997

16

AGE-RELATED DIFFERENCES ON THE ENHANCEMENT OF NON- DOMINANT HAND MOTOR FUNCTION AFTER PARALLEL INTERVENTION OF ANODAL TDCS AND MOTOR TASK: A TMS STUDY

Kakoura, E., Baka, K., Katsoulaki, M., Dang, M., Fotiou, S., Nowicky, A.

Journal:

British Journal of Sports Medicine

Year:

2013

Language:

english

File:

PDF, 56 KB

english, 2013

17

Radiation Therapy And Vaginal Squamous Cell Carcinoma: An Analysis Of The Surveillance, Epidemiology And End-results (SEER) Registry

Katsoulakis, E., Surapaneni, A., Boo, D., Sroufe, R., Olsheski, M., Sura, S., Chen, W., Choi, K., Rotman, M., Schreiber, D.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2011

Language:

english

File:

PDF, 39 KB

english, 2011

18

Computerized tomography-based radiotherapy improves heterotopic ossification outcomes

Mourad, Waleed F., Packianathan, Satya, Ma, John K., Yang, Claus (Chunli), Shourbaji, Rania A., He, Rui, Zhang, Zhen, Kanakamedala, Madhava Rao, Khan, Majid A., Mobit, Paul, Katsoulakis, Evangelia, Na

Journal:

Year:

2013

Language:

english

File:

PDF, 1.31 MB

english, 2013

19

Salvage Radiotherapy Leads to Worse Overall Survival Compared to Adjuvant Radiotherapy in Oral Cavity Carcinoma: A Matched Analysis

Katsoulakis, E., Leeman, J.E., Shi, W., Zhigang, Z., Morris, L., Sherman, E., Cohen, M., Tsai, C.J., McBride, S., Ganly, I., Lee, N., Riaz, N.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2017

Language:

english

File:

PDF, 186 KB

english, 2017

20

Path space force matching and relative entropy methods for coarse-graining molecular systems at transient regimes

Kalligiannaki, Evangelia, Katsoulakis, Markos, Plechac, Petr, Harmandaris, Vagelis

Journal:

Procedia Computer Science

Year:

2018

Language:

english

File:

PDF, 491 KB

english, 2018

21

Radiomic analysis identifies tumor subtypes associated with distinct molecular and microenvironmental factors in head and neck squamous cell carcinoma

Katsoulakis, Evangelia, Yu, Yao, Apte, Aditya P., Leeman, Jonathan E., Katabi, Nora, Morris, Luc, Deasy, Joseph O., Chan, Timothy A., Lee, Nancy Y., Riaz, Nadeem, Hatzoglou, Vaios, Oh, Jung Hun

Journal:

Year:

2020

File:

PDF, 1.86 MB

2020

22

Activity and specificity studies of the new thermostable esterase EstDZ2

Myrtollari, Kamela, Katsoulakis, Nikolaos, Zarafeta, Dimitra, Pavlidis, Ioannis V., Skretas, Georgios, Smonou, Ioulia

Journal:

Bioorganic Chemistry

Year:

2020

File:

PDF, 2.48 MB

2020

23

Long-term Outcomes of Postoperative Radiation Therapy for Major Salivary Gland Tumors

Riaz, N., Salgado, L.R., Katsoulakis, E., Ong, A., Ho, F., Hu, M., Wong, R., Wolden, S., Rao, S., Lee, N.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2012

Language:

english

File:

PDF, 51 KB

english, 2012

24

Spatially adaptive grand canonical ensemble Monte Carlo simulations

Chatterjee, A., Katsoulakis, M. A., Vlachos, D. G.

Journal:

Physical Review E

Year:

2005

Language:

english

File:

PDF, 253 KB

english, 2005

25

Causality and Bayesian Network PDEs for multiscale representations of porous media

Um, Kimoon, Hall, Eric J., Katsoulakis, Markos A., Tartakovsky, Daniel M.

Journal:

Journal of Computational Physics

Year:

2019

Language:

english

File:

PDF, 6.89 MB

english, 2019

26

Planned Neck Dissection Improves Survival in N2-3 Head and Neck Cancer

J. Rineer, D. Schreiber, A. Kim, T. Nabhani, D. Vongtama, E. Katsoulakis, P. Han, E. Nwokedi, K. Choi, M. Rotman

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2008

Language:

english

File:

PDF, 55 KB

english, 2008

27

Numerical and Statistical Methods for

Markos A. Katsoulakis, Petr Plecháč, Luc Rey-Bellet

Journal:

Journal of Scientific Computing

Year:

2008

Language:

english

File:

PDF, 863 KB

english, 2008

28

[IEEE 19th IEEE International Parallel and Distributed Processing Symposium - Denver, CO, USA (04-08 April 2005)] 19th IEEE International Parallel and Distributed Processing Symposium - A Low-Power Reconfigurable Datapath for Advanced Speech Coding Algorithms

Katsoulakis, K., Arslan, T., Kirkham, T., Khawam, S.

Year:

2005

Language:

english

File:

PDF, 297 KB

english, 2005

29

Survival Following Sublobar Resection for Early-Stage Non-Small Cell Lung Cancer With or Without Adjuvant External Beam Radiation Therapy

Rineer, Justin, Schreiber, David, Katsoulakis, Evangelia, Nabhani, Thomas, Han, Peter, Lange, Christopher, Choi, Kwang, Rotman, Marvin

Journal:

Year:

2010

Language:

english

File:

PDF, 145 KB

english, 2010

30

Stereotactic Body Radiotherapy in the Treatment of Spinal Metastases

Katsoulakis, Evangelia, Kumar, Kiran, Laufer, Ilya, Yamada, Yoshiya

Journal:

Seminars in Radiation Oncology

Year:

2017

Language:

english

File:

PDF, 752 KB

english, 2017

31

Breast Cancer Subtype as a Predictor of Lymph Node Metastasis according to the SEER Registry

Mattes, Malcolm D., Bhatia, Jay K., Metzger, Daniel, Ashamalla, Hani, Katsoulakis, Evangelia

Journal:

Journal of Breast Cancer

Year:

2015

Language:

english

File:

PDF, 192 KB

english, 2015

32

Coarse-grained stochastic processes and Monte Carlo simulations in lattice systems

Markos A. Katsoulakis, Andrew J. Majda, Dionisios G. Vlachos

Journal:

Journal of Computational Physics

Year:

2003

Language:

english

File:

PDF, 325 KB

english, 2003

33

Mesoscopic modeling of transport and reaction in microporous crystalline membranes

M.A. Snyder, D.G. Vlachos, M.A. Katsoulakis

Journal:

Chemical Engineering Science

Year:

2003

Language:

english

File:

PDF, 324 KB

english, 2003

34

Novel Concepts In Dysphagia, Larynx And Pharyngeal Constrictors Tolerance

Mourad, W.F., Hu, K., Shasha, D., Choi, W., Rauth, S., Katsoulakis, E., Woode, R., Harrison, L.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2011

Language:

english

File:

PDF, 42 KB

english, 2011

35

Temporary organ displacement (TOD) for radiation oncology; technical aspects and clinical outcomes

Tahour, D., Maybody, M., Yamada, J., Katsoulakis, E., Zatcky, J., Erinjeri, J.P., Alago, W., Thornton, R.H., Solomon, S.B.

Journal:

Journal of Vascular and Interventional Radiology

Year:

2014

Language:

english

File:

PDF, 45 KB

english, 2014

36

Generic Penetration Within Top-10 Genericized Molecules – Greece Versus Major European Countries

Charitonidis, S., Kofinas, K., Katsoulakis, M., Papadopoulos, K., Ollandezos, M., Kyriopoulos, J.

Journal:

Value in Health

Year:

2014

Language:

english

File:

PDF, 79 KB

english, 2014

37

The geometry of generalized force matching and related information metrics in coarse-graining of molecular systems

Kalligiannaki, Evangelia, Harmandaris, Vagelis, Katsoulakis, Markos A., Plecháč, Petr

Journal:

The Journal of Chemical Physics

Year:

2015

Language:

english

File:

PDF, 1001 KB

english, 2015

38

Information Loss in Coarse-Graining of Stochastic Particle Dynamics

Markos A. Katsoulakis, José Trashorras

Journal:

Journal of Statistical Physics

Year:

2006

Language:

english

File:

PDF, 1.51 MB

english, 2006

39

Coarse-grained stochastic processes and kinetic Monte Carlo simulators for the diffusion of interacting particles

Katsoulakis, Markos A., Vlachos, Dionisios G.

Journal:

The Journal of Chemical Physics

Year:

2003

Language:

english

File:

PDF, 495 KB

english, 2003

40

Prognostic Factors Associated With Survival In Melanoma Of The Vulva And Vagina

McCool, J.K., Anderson, B., Guirguis, A., Katsoulakis, E., Parikh, K.J., Ashamalla, H.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2016

Language:

english

File:

PDF, 51 KB

english, 2016

41

Parametric sensitivity analysis for stochastic molecular systems using information theoretic metrics

Tsourtis, Anastasios, Pantazis, Yannis, Katsoulakis, Markos A., Harmandaris, Vagelis

Journal:

The Journal of Chemical Physics

Year:

2015

Language:

english

File:

PDF, 1.42 MB

english, 2015

42

Patterns of care and outcomes of adjuvant therapy for high-risk head and neck cancer after surgery

Osborn, Virginia Wedell, Givi, Babak, Rineer, Justin, Roden, Dylan, Sheth, Niki, Lederman, Ariel, Katsoulakis, Evangelia, Hu, Kenneth, Schreiber, David

Journal:

Year:

2018

Language:

english

File:

PDF, 622 KB

english, 2018

43

Robust Information Divergences for Model-Form Uncertainty Arising from Sparse Data in Random PDE

Hall, Eric Joseph, Katsoulakis, Markos A.

Journal:

SIAM/ASA Journal on Uncertainty Quantification

Year:

2018

Language:

english

File:

PDF, 986 KB

english, 2018

44

Relaxation Approximations to Front Propagation

Shi Jin, Markos A. Katsoulakis

Journal:

Journal of Differential Equations

Year:

1997

Language:

english

File:

PDF, 238 KB

english, 1997

45

A Comparison Principle for Hamilton–Jacobi Equations Related to Controlled Gradient Flows in Infinite Dimensions

Jin Feng, Markos Katsoulakis

Journal:

Archive for Rational Mechanics and Analysis

Year:

2009

Language:

english

File:

PDF, 387 KB

english, 2009

46

Day 0 (D0) D90 of Approximately 70% Correlates with Day 30 (D30) D 90 of 90% For Patients Undergoing Permanent I-125 Radioactive Seed Implant of the Prostate

S.J. Rauth, D. Shasha, R. Ambrose, E. Katsoulakis, R. Patal, W. Mourad, L.B. Harrison

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2011

Language:

english

File:

PDF, 57 KB

english, 2011

47

Coarse-grained stochastic processes for microscopic lattice systems

Katsoulakis, M. A., Majda, A. J., Vlachos, D. G.

Journal:

Proceedings of the National Academy of Sciences

Year:

2003

Language:

english

File:

PDF, 260 KB

english, 2003

48

Parametric sensitivity analysis for biochemical reaction networks based on pathwise information theory

Yannis Pantazis,Markos A Katsoulakis,Dionisios G Vlachos

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 540 KB

english, 2013

49

Dose-Escalated Postprostatectomy Salvage Radiation Therapy: Is 81 Gy Safe and Effective?

Mourad, W.F., Patel, S., Kabarriti, R., Young, R., Gámez, M., Lukens, J.N., Patel, R., Concert, C., Ryniak, M., Shourbaji, R.A., Nabhani, T., Katsoulakis, E., Santoro, J., Salant, R., Dinlenc, C., Gol

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2014

Language:

english

File:

PDF, 61 KB

english, 2014

50

Contemporary analysis of pelvic and para-aortic metastasis in endometrial cancer using the SEER registry

Katsoulakis, Evangelia, Mattes, Malcolm D., Rineer, Justin M., Nabhani, Thomas, Mourad, Waleed F., Choi, Kwang, Schreiber, David

Journal:

International Journal of Gynecology & Obstetrics

Year:

2014

Language:

english

File:

PDF, 174 KB

english, 2014

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